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Table 2 Top 25 downregulated genes in the Y-33075-treated group versus the control solvent group

From: Evaluation of Rho kinase inhibitor effects on neuroprotection and neuroinflammation in an ex-vivo retinal explant model

Gene ID

Gene name

log2 Fold Change

padj

Ccl2

C–C motif chemokine ligand

− 4.767

4.64E-19

Qpct

Glutaminyl-peptide cyclotransferase

− 4.774

2.20E-299

Fam135b

Family with sequence similarity 135, member B

− 4.811

6.41E-303

Stab1

Stabilin 1

− 4.916

6.31E-62

Slc24a4

Solute carrier family 24 member 4

− 4.994

0.00E + 00

Gpr179

G protein-coupled receptor 179

− 5.01

1.15E-204

Lyz2

Lysozyme 2

− 5.135

2.76E-54

Sebox

SEBOX homeobox

− 5.306

1.39E-238

Gabrr1

Gamma-aminobutyric acid type A receptor subunit rho 1

− 5.339

0.00E + 00

Cfh

Complement factor H

− 5.384

3.97E-64

C1qa

Complement C1q A chain

− 5.399

1.25E-29

Grm6

Glutamate metabotropic receptor 6

− 5.54

0.00E + 00

C1qc

Complement C1q C chain

− 5.657

7.41E-46

Gsg1

Germ cell associated 1

− 5.751

7.46E-112

Cx3cr1

C-X3-C motif chemokine receptor 1

− 5.772

1.55E-46

Lrit2

Leucine-rich repeat, Ig-like and transmembrane domains 2

− 5.932

8.24E-68

Tafa3

TAFA chemokine like family member 3

− 5.963

1.40E-234

C1qb

Complement C1q B chain

− 5.967

1.89E-25

Csf1r

Colony stimulating factor 1 receptor

− 6.232

6.17E-90

Lactbl1

Lactamase beta like 1

− 6.266

5.21E-170

Ncf1

Neutrophil cytosolic factor 1

− 6.329

6.25E-76

Ptgds

Prostaglandin D2 synthase

− 6.378

3.55E-250

Adgre1

Adhesion G protein-coupled receptor E1

− 6.841

1.44E-54

Pcp2

Purkinje cell protein 2

− 7.392

4.28E-229

Lrit1

Leucine-rich repeat, Ig-like and transmembrane domains 1

− 7.804

0